STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18826.1KEGG: dar:Daro_2791 transglycosylase-associated protein. (83 aa)    
Predicted Functional Partners:
EDY18825.1
PFAM: tRNA-hydroxylase; KEGG: maq:Maqu_1858 tRNA--hydroxylase.
       0.608
EDY18824.1
Hypothetical protein.
       0.535
EDY16208.1
PFAM: SWIB/MDM2 domain protein; KEGG: har:HEAR2779 hypothetical protein.
  
    0.510
EDY18611.1
PFAM: CsbD family protein; KEGG: fjo:Fjoh_2319 CsbD family protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.471
EDY20942.1
PFAM: fatty acid desaturase; KEGG: mxa:MXAN_3855 fatty acid desaturase family protein.
  
     0.438
EDY18827.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: bcl:ABC3276 dehydrogenase.
       0.432
EDY21709.1
Two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sus:Acid_5582 response regulator receiver protein.
   
    0.407
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.