STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18893.1KEGG: eba:ebA6939 hypothetical protein. (257 aa)    
Predicted Functional Partners:
EDY17272.1
PFAM: glycosyl transferase group 1; KEGG: pfo:Pfl_4432 glycosyl transferase, group 1.
  
     0.706
EDY17274.1
Hypothetical protein; KEGG: dge:Dgeo_0737 GCN5-related N-acetyltransferase.
  
     0.572
EDY20468.1
KEGG: bba:Bd2942 hypothetical protein.
 
    0.535
EDY18891.1
PFAM: glycosyl transferase group 1; KEGG: gur:Gura_2602 glycosyl transferase, group 1.
 
     0.521
EDY19822.1
PFAM: Carbohydrate-selective porin OprB; KEGG: gox:GOX2029 putative porin B precursor outer transmembrane protein; Belongs to the OprB family.
  
     0.503
EDY18894.1
Hypothetical protein.
       0.463
rpsU
PFAM: ribosomal protein S21; KEGG: cpt:CpB0035 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
     0.454
EDY17164.1
KEGG: cyb:CYB_0085 hypothetical protein.
  
     0.434
EDY21988.1
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: rba:RB12056 conserved hypothetical protein containing TPR domain.
  
     0.412
EDY20324.1
PFAM: acyl-CoA reductase; KEGG: blo:BL0513 possible acyl-CoA reductase.
  
     0.407
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.