STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18444.1PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rba:RB7562 probable lipase/esterase. (288 aa)    
Predicted Functional Partners:
EDY22239.1
PFAM: phosphopantetheine-binding; KEGG: mxa:MXAN_4528 polyketide synthase.
  
 0.836
EDY16043.1
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: swi:Swit_5286 alpha/beta hydrolase fold-3 domain protein.
  
     0.753
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.491
EDY22265.1
PFAM: Pectinesterase; KEGG: sde:Sde_3447 pectin methylesterase-like.
 
  
  0.488
EDY22238.1
KR domain protein; PFAM: short-chain dehydrogenase/reductase SDR; Alcohol dehydrogenase zinc-binding domain protein; KR domain protein; KEGG: bur:Bcep18194_A3873 beta-ketoacyl synthase.
  
 0.478
EDY18446.1
KEGG: gur:Gura_3133 hypothetical protein.
       0.460
EDY18447.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pcu:pc0390 hypothetical protein.
       0.460
EDY16847.1
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; KEGG: aba:Acid345_4052 AMP-dependent synthetase and ligase.
  
  0.411
EDY22237.1
Erythronolide synthase; PFAM: Methyltransferase type 11; Methyltransferase type 12; Beta-ketoacyl synthase; Acyl transferase; KEGG: hau:Haur_1873 beta-ketoacyl synthase.
  
 0.409
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.