STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18456.1PFAM: glycoside hydrolase family 16; KEGG: amr:AM1_3194 type I secretion target repeat protein. (271 aa)    
Predicted Functional Partners:
EDY18210.1
KEGG: rba:RB5008 hypothetical protein-transmembrane region and signal peptide prediction; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.483
EDY18455.1
ABC transporter-related protein; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_2159 ABC transporter related.
 
     0.473
EDY18457.1
PFAM: glucose-methanol-choline oxidoreductase; KEGG: sus:Acid_7382 glucose-methanol-choline oxidoreductase.
       0.453
EDY16487.1
PFAM: aldo/keto reductase; KEGG: bja:bll6256 probable dehydrogenase.
 
      0.451
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.