STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18529.1PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: rba:RB695 N-acetyl-galactosamine-6-sulfatase (GALNS). (626 aa)    
Predicted Functional Partners:
EDY18528.1
PFAM: sulfatase; KEGG: bfr:BF3949 putative secreted sulfatase YdeN precursor.
 
    
0.811
EDY20972.1
PFAM: sulfatase; KEGG: rba:RB11127 iduronate-2-sulfatase.
 
     0.767
EDY18527.1
Hypothetical protein; KEGG: cpy:Cphy_1800 glycoside hydrolase family 18.
       0.714
EDY19012.1
KEGG: rba:RB5383 probable sulfatase AtsG.
  
     0.626
EDY18530.1
Hypothetical protein.
       0.613
EDY18531.1
KEGG: aba:Acid345_4368 hypothetical protein.
       0.613
EDY16216.1
PFAM: Radical SAM domain protein; KEGG: sfu:Sfum_2157 radical SAM domain protein.
  
   0.611
EDY22318.1
PFAM: sulfatase; KEGG: rxy:Rxyl_0854 sulfatase.
  
     0.596
EDY18524.1
Hypothetical protein.
       0.433
EDY18525.1
KEGG: chu:CHU_2399 hypothetical protein.
       0.433
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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