STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18256.1KEGG: sco:SCO7037 secreted protein. (906 aa)    
Predicted Functional Partners:
EDY21553.1
PFAM: cyclase/dehydrase; KEGG: nmu:Nmul_A1527 cyclase/dehydrase.
  
     0.530
EDY20058.1
KEGG: hau:Haur_1170 carbohydrate-binding CenC domain protein.
  
  
  0.507
EDY22436.1
PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: hau:Haur_2138 cellulose-binding family II.
  
 
  0.486
EDY16886.1
Carbohydrate binding family 6; PFAM: Fibronectin type III domain protein; Carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: sco:SCO7170 secreted sugar hydrolase.
  
 
  0.480
EDY21814.1
PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: mes:Meso_2109 transcriptional regulator, MarR family with acetyltransferase activity.
  
    0.466
EDY16326.1
PFAM: Carbohydrate-binding CenC domain protein; SMART: LamG domain protein jellyroll fold domain protein; KEGG: sde:Sde_0112 hypothetical protein.
  
 
  0.466
EDY20619.1
Ricin B lectin; PFAM: coagulation factor 5/8 type domain protein; Ricin B lectin; Fibronectin type III domain protein; KEGG: aav:Aave_2675 coagulation factor 5/8 type domain protein.
  
     0.461
EDY18326.1
PFAM: Carbohydrate-binding CenC domain protein; SMART: LamG domain protein jellyroll fold domain protein; KEGG: sde:Sde_0112 hypothetical protein.
  
 
  0.426
EDY21750.1
KEGG: sde:Sde_2872 hypothetical protein.
  
     0.422
EDY20783.1
Hypothetical protein; KEGG: scl:sce5344 no similarity.
  
     0.410
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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