STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18258.1PFAM: polysaccharide deacetylase; KEGG: eba:ebA4258 polysaccharide deacetylase. (271 aa)    
Predicted Functional Partners:
EDY18257.1
PFAM: glycosyl transferase family 2; KEGG: mag:amb3673 glycosyltransferase involved in cell wall biogenesis.
  
 
  0.777
EDY18259.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: fra:Francci3_3844 NAD-dependent epimerase/dehydratase.
  
    0.774
EDY21958.1
TIGRFAM: eight transmembrane protein EpsH; PFAM: Eight transmembrane protein EpsH; KEGG: sus:Acid_0454 eight transmembrane protein EpsH.
  
     0.755
EDY18260.1
PFAM: FAD dependent oxidoreductase; KEGG: fra:Francci3_3845 4Fe-4S ferredoxin, iron-sulfur binding.
 
     0.686
EDY17474.1
TIGRFAM: eight transmembrane protein EpsH; PFAM: Eight transmembrane protein EpsH; KEGG: dar:Daro_2406 hypothetical protein.
  
     0.676
EDY20264.1
PFAM: glycosyl transferase group 1; KEGG: rru:Rru_A3107 glycosyl transferase, group 1.
  
     0.635
EDY19587.1
Hypothetical protein; KEGG: dvl:Dvul_3054 eight transmembrane protein EpsH.
  
     0.632
EDY18261.1
Hypothetical protein.
       0.625
EDY20265.1
PFAM: glycosyl transferase group 1; KEGG: scl:sce1025 glycosyltransferase.
  
     0.578
EDY19771.1
KEGG: dol:Dole_2299 hypothetical protein.
  
     0.557
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.