STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18303.1PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: rba:RB8437 similar to cis/trans isomerase. (880 aa)    
Predicted Functional Partners:
EDY19075.1
KEGG: mxa:MXAN_5541 cytochrome c oxidase, cbb3-type, subunit I/II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome C oxidase mono-heme subunit/FixO; Belongs to the heme-copper respiratory oxidase family.
  
 0.977
EDY19943.1
PFAM: cytochrome c class I; KEGG: aba:Acid345_0435 hypothetical protein.
  
 0.954
EDY16652.1
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.904
EDY18864.1
PFAM: protein of unknown function DUF1549; KEGG: rba:RB6511 hypothetical protein.
 
     0.823
EDY19828.1
PFAM: NHL repeat containing protein; KEGG: sus:Acid_6565 NHL repeat containing protein.
  
   0.805
EDY18581.1
KEGG: rba:RB4803 hypothetical protein-signal peptide prediction.
  
 
  0.782
EDY22070.1
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_3953 protein of unknown function DUF1501.
  
     0.775
EDY22114.1
PFAM: protein of unknown function DUF1501; KEGG: rba:RB12159 hypothetical protein.
  
     0.775
EDY22115.1
PFAM: protein of unknown function DUF1501; KEGG: rba:RB12159 hypothetical protein.
  
     0.775
EDY22390.1
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_0975 protein of unknown function DUF1501.
  
     0.775
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.