STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18366.1Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rba:RB8796 probable GntR-family transcription regulator. (267 aa)    
Predicted Functional Partners:
EDY18367.1
PFAM: FG-GAP repeat protein; KEGG: rba:RB8789 hypothetical protein.
 
     0.647
EDY18368.1
PFAM: glycosyl hydrolase BNR repeat-containing protein; Glycosyl hydrolase family 32 domain protein; KEGG: fjo:Fjoh_4078 glycosyl hydrolase, BNR repeat-containing protein.
 
     0.626
EDY18369.1
Dihydrodipicolinate synthetase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. Belongs to the DapA family.
       0.576
EDY18370.1
Hypothetical protein.
       0.512
EDY20722.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: cau:Caur_0099 transcriptional regulator IclR.
  
    0.503
EDY20052.1
TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: mba:Mbar_A0219 acetolactate synthase 3 regulatory subunit.
  
    0.482
EDY18371.1
PFAM: carbohydrate kinase FGGY; KEGG: rba:RB8788 ribulokinase; Belongs to the FGGY kinase family.
       0.461
EDY18372.1
KEGG: sus:Acid_1003 putative L-fucose isomerase.
       0.461
EDY18365.1
Hypothetical protein.
       0.442
EDY20938.1
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mxa:MXAN_3856 iron-sulfur cluster-binding protein, Rieske family.
     
 0.410
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.