STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18119.1ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_1770 ATPase. (253 aa)    
Predicted Functional Partners:
EDY22095.1
PFAM: permease YjgP/YjgQ family protein; KEGG: tpt:Tpet_1030 permease YjgP/YjgQ family protein.
 
 
 0.991
EDY21679.1
PFAM: permease YjgP/YjgQ family protein; KEGG: gur:Gura_3734 permease YjgP/YjgQ family protein.
 
 
 0.991
EDY17816.1
PFAM: ABC-2 type transporter; KEGG: pol:Bpro_3454 ABC-2.
   
  0.934
EDY15866.1
PFAM: inner-membrane translocator; KEGG: swo:Swol_2554 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
      0.898
EDY18124.1
TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: gsu:GSU1894 2-dehydro-3-deoxyphosphooctonate aldolase.
 
   
 0.863
EDY21556.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rba:RB5056 ABC transporter, ATP-binding protein.
 
     
0.848
EDY18123.1
Hypothetical protein.
       0.798
EDY18125.1
Hypothetical protein; KEGG: sfu:Sfum_3650 conserved hypothetical cytosolic protein.
       0.777
EDY18120.1
Hypothetical protein.
       0.773
EDY18121.1
ABC transporter-related protein; KEGG: mgm:Mmc1_0732 ABC transporter related.
       0.773
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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