STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18166.1PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: aba:Acid345_3624 rubrerythrin. (317 aa)    
Predicted Functional Partners:
EDY20680.1
KEGG: sme:SMc04328 hypothetical lipoprotein signal peptide.
  
     0.543
EDY19368.1
PFAM: protein of unknown function DUF162; KEGG: chu:CHU_1019 possible ferrodoxin.
    
   0.533
EDY18167.1
Hypothetical protein.
       0.513
EDY16359.1
KEGG: hau:Haur_4101 integral membrane protein-like.
  
     0.500
EDY21732.1
PFAM: Ferritin Dps family protein; KEGG: fal:FRAAL0786 putative bacterioferritin.
    
 0.482
EDY19714.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
  0.454
EDY22176.1
PFAM: thiamineS protein; KEGG: osa:4329680 Os02g0558300.
   
 
  0.443
EDY19153.1
PFAM: thiamineS protein; KEGG: scl:sce5755 hypothetical protein.
   
 
  0.443
EDY21266.1
Bacteriophage capsid protein-like protein; KEGG: syf:Synpcc7942_0733 phage portal protein, lambda.
  
     0.400
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.