Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDY17957.1 | EDY17958.1 | CfE428DRAFT_4387 | CfE428DRAFT_4388 | PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4. | Hypothetical protein; KEGG: amr:AM1_E0086 methyltransferase, FkbM family. | 0.439 |
EDY17958.1 | EDY17957.1 | CfE428DRAFT_4388 | CfE428DRAFT_4387 | Hypothetical protein; KEGG: amr:AM1_E0086 methyltransferase, FkbM family. | PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4. | 0.439 |
EDY17958.1 | EDY17959.1 | CfE428DRAFT_4388 | CfE428DRAFT_4389 | Hypothetical protein; KEGG: amr:AM1_E0086 methyltransferase, FkbM family. | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: scl:sce6916 TPR domain protein. | 0.511 |
EDY17959.1 | EDY17958.1 | CfE428DRAFT_4389 | CfE428DRAFT_4388 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: scl:sce6916 TPR domain protein. | Hypothetical protein; KEGG: amr:AM1_E0086 methyltransferase, FkbM family. | 0.511 |