STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18018.1SMART: von Willebrand factor type A; KEGG: rba:RB7502 hypothetical protein. (621 aa)    
Predicted Functional Partners:
EDY18019.1
PFAM: von Willebrand factor type A; KEGG: rba:RB7503 conserved hypothetical protein-putative chloride channel.
  
  0.983
EDY18017.1
PFAM: protein of unknown function DUF58; SMART: von Willebrand factor type A; KEGG: scl:sce5904 hypothetical protein.
 
    0.948
EDY17307.1
PFAM: von Willebrand factor type A; protein of unknown function DUF1355; KEGG: rba:RB12409 hypothetical protein.
     0.891
EDY21108.1
KEGG: swo:Swol_1719 methanol dehydrogenase regulator.
  
 
  0.780
EDY21111.1
Hypothetical protein; KEGG: scl:sce5906 putative exported glycine/glutamine-rich protein.
  
     0.771
EDY17315.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2419 ABC transporter related.
  
     0.680
EDY17316.1
KEGG: rba:RB6045 hypothetical protein-transmembrane prediction.
  
     0.656
EDY17318.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hau:Haur_3146 ABC transporter related.
  
     0.554
EDY19904.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rba:RB7495 conserved hypothetical protein-containing TPR-domains.
 
   
 0.551
EDY21597.1
KEGG: scl:sce7629 hypothetical protein.
  
     0.529
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.