STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY17712.1PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: ace:Acel_1186 protein of unknown function DUF245 domain protein. (506 aa)    
Predicted Functional Partners:
EDY21836.1
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: ace:Acel_1184 vesicle-fusing ATPase; Belongs to the AAA ATPase family.
  
 0.840
EDY22239.1
PFAM: phosphopantetheine-binding; KEGG: mxa:MXAN_4528 polyketide synthase.
  
 0.817
EDY18809.1
PFAM: 20S proteasome A and B subunits; KEGG: sco:SCO1644 20S proteasome beta-subunit precursor.
 
   
 0.808
EDY18808.1
PFAM: 20S proteasome A and B subunits; KEGG: nca:Noca_2646 20S proteasome, A and B subunits.
 
   
 0.802
EDY22238.1
KR domain protein; PFAM: short-chain dehydrogenase/reductase SDR; Alcohol dehydrogenase zinc-binding domain protein; KR domain protein; KEGG: bur:Bcep18194_A3873 beta-ketoacyl synthase.
  
 
 0.801
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
  
     0.735
EDY17713.1
PFAM: lipolytic protein G-D-S-L family; KEGG: pdi:BDI_3071 hypothetical protein.
       0.628
EDY22237.1
Erythronolide synthase; PFAM: Methyltransferase type 11; Methyltransferase type 12; Beta-ketoacyl synthase; Acyl transferase; KEGG: hau:Haur_1873 beta-ketoacyl synthase.
  
 
 0.580
EDY17714.1
Hypothetical protein.
       0.525
EDY16513.1
PFAM: cyclic nucleotide-binding; KEGG: fra:Francci3_4286 transcriptional regulator, Crp/Fnr family.
  
    0.525
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.