STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY17733.1PFAM: protein of unknown function DUF1222; KEGG: hsa:64788 lipase maturation factor 1. (521 aa)    
Predicted Functional Partners:
EDY16810.1
KEGG: tet:TTHERM_00732700 hypothetical protein Pfam: DUF1695 PROSITE: ZINC_PROTEASE.
  
     0.626
EDY16954.1
Hypothetical protein; KEGG: lma:LmjF35.0520 proteophosphoglycan ppg4.
  
    0.593
EDY17732.1
Hypothetical protein.
       0.556
EDY19247.1
PFAM: C-type lectin domain protein; KEGG: gga:396477 F-box and leucine-rich repeat protein 12.
  
     0.545
EDY18669.1
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mxa:MXAN_4930 amine oxidase, flavin-containing.
  
     0.513
EDY22165.1
Chromosome segregation ATPase-like protein; KEGG: lma:LmjF34.0690 hypothetical protein, conserved.
  
    0.479
EDY17734.1
Membrane protein-like protein; KEGG: sus:Acid_5811 hypothetical protein.
       0.463
EDY16650.1
KEGG: ade:Adeh_0229 FAD dependent oxidoreductase.
 
     0.463
EDY17965.1
SMART: WD-40 repeat protein; KEGG: rrs:RoseRS_4025 NB-ARC domain protein.
  
     0.456
EDY16153.1
KEGG: mcc:707579 hypothetical protein LOC707579.
  
     0.439
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.