STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY17755.1KEGG: sfr:Sfri_3908 hypothetical protein. (214 aa)    
Predicted Functional Partners:
EDY19063.1
Nitrite reductase, copper-containing; KEGG: bba:Bd2608 major anaerobically induced transmembrane protein; TIGRFAM: nitrite reductase, copper-containing; PFAM: blue (type 1) copper domain protein; cytochrome c class I; multicopper oxidase type 2.
   
 0.705
EDY16986.1
PFAM: cytochrome c class I; KEGG: bba:Bd2608 major anaerobically induced transmembrane protein.
   
 0.705
EDY17756.1
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dol:Dole_0867 PAS/PAC sensor hybrid histidine kinase.
 
     0.674
EDY17757.1
Hypothetical protein.
       0.649
EDY16057.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: sus:Acid_7737 cupin 2, conserved barrel domain protein.
  
     0.552
EDY16660.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 0.549
EDY20765.1
PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: mmr:Mmar10_2282 multicopper oxidase.
   
  0.527
EDY18040.1
PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: neu:NE1543 multicopper oxidase type 1.
   
  0.527
EDY22117.1
PFAM: PKD domain containing protein; SMART: LamG domain protein jellyroll fold domain protein; KEGG: chu:CHU_1052 hypothetical protein.
 
   0.522
EDY22356.1
PFAM: PKD domain containing protein; SMART: LamG domain protein jellyroll fold domain protein; KEGG: chu:CHU_1052 hypothetical protein.
 
   0.514
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.