STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY17310.1KEGG: bvi:Bcep1808_4061 hypothetical protein. (161 aa)    
Predicted Functional Partners:
EDY17311.1
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rba:RB6603 methanol dehydrogenase regulatory protein (MoxR).
       0.648
EDY17309.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: dge:Dgeo_1709 cupin 2, conserved barrel.
       0.459
EDY17303.1
KEGG: rba:RB10354 hypothetical protein-putative transmembrane protein.
       0.422
EDY17304.1
PFAM: extracellular solute-binding protein family 1; KEGG: syn:sll0237 putative ABC-type iron transport system substrate-binding protein.
       0.422
EDY17305.1
KEGG: fre:Franean1_5339 binding-protein-dependent transport systems inner membrane component.
       0.422
EDY17306.1
PFAM: NHL repeat containing protein; ABC transporter related; SMART: AAA ATPase; KEGG: rba:RB10820 ring finger protein HAC1.
       0.422
EDY17307.1
PFAM: von Willebrand factor type A; protein of unknown function DUF1355; KEGG: rba:RB12409 hypothetical protein.
       0.422
EDY17308.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: sth:STH2111 hypothetical protein.
       0.422
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.