STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY17262.1PFAM: FAD linked oxidase domain protein; KEGG: mxa:MXAN_6630 putative FAD-dependent dehydrogenase. (402 aa)    
Predicted Functional Partners:
EDY17261.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cte:CT0169 oxidoreductase, short-chain dehydrogenase/reductase family.
 
     0.947
EDY17263.1
PFAM: UbiA prenyltransferase; KEGG: mxa:MXAN_6629 prenyltransferase, UbiA family; Belongs to the UbiA prenyltransferase family.
 
  
  0.915
EDY17293.1
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rca:Rcas_1903 glutamate synthase (ferredoxin).
    
 0.787
EDY19813.1
TIGRFAM: dihydroneopterin aldolase; KEGG: pat:Patl_1044 dihydroneopterin aldolase.
    
  0.620
EDY16619.1
PFAM: aminotransferase class-III; KEGG: mca:MCA0809 acetylornithine aminotransferase, putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
      0.597
EDY19063.1
Nitrite reductase, copper-containing; KEGG: bba:Bd2608 major anaerobically induced transmembrane protein; TIGRFAM: nitrite reductase, copper-containing; PFAM: blue (type 1) copper domain protein; cytochrome c class I; multicopper oxidase type 2.
    
 0.578
EDY16986.1
PFAM: cytochrome c class I; KEGG: bba:Bd2608 major anaerobically induced transmembrane protein.
    
 0.578
EDY17260.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: gvi:glr1179 similar to CDP-tyvelose epimerase.
  
    0.549
EDY22239.1
PFAM: phosphopantetheine-binding; KEGG: mxa:MXAN_4528 polyketide synthase.
  
 0.506
EDY22238.1
KR domain protein; PFAM: short-chain dehydrogenase/reductase SDR; Alcohol dehydrogenase zinc-binding domain protein; KR domain protein; KEGG: bur:Bcep18194_A3873 beta-ketoacyl synthase.
  
 0.503
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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