STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY16962.1PFAM: DoxX family protein; KEGG: afw:Anae109_4189 DoxX family protein. (139 aa)    
Predicted Functional Partners:
EDY16652.1
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
  0.703
EDY17795.1
KEGG: sru:SRU_1812 hypothetical protein.
  
     0.562
EDY16178.1
PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: reu:Reut_A3083 twin-arginine translocation pathway signal.
 
 
 0.528
EDY17793.1
5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase-like protein; KEGG: rba:RB6885 probable cytochrome c-554.
  
  
  0.522
EDY17803.1
TIGRFAM: conserved hypothetical membrane protein; PFAM: protein of unknown function DUF1550; KEGG: sru:SRU_2413 protein of unknown function (DUF1550) family.
  
     0.509
EDY22016.1
PFAM: Pyrrolo-quinoline quinone; Xylose isomerase domain protein TIM barrel; KEGG: swi:Swit_1900 quinoprotein glucose dehydrogenase.
  
  
  0.508
EDY21362.1
PFAM: protein of unknown function DUF692; Xylose isomerase domain protein TIM barrel; KEGG: aba:Acid345_0527 protein of unknown function DUF692.
 
  
 0.477
EDY16455.1
PFAM: protein of unknown function DUF692; KEGG: aba:Acid345_0527 protein of unknown function DUF692.
 
  
 0.477
EDY18484.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: scl:sce3024 NADH dehydrogenase.
    
  0.447
EDY18232.1
PFAM: Pyrrolo-quinoline quinone; KEGG: rba:RB7541 similar to serine/threonine protein kinase related protein.
  
     0.430
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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