STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY16438.1KEGG: sus:Acid_2692 hypothetical protein. (97 aa)    
Predicted Functional Partners:
EDY17293.1
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rca:Rcas_1903 glutamate synthase (ferredoxin).
    
  0.745
EDY16439.1
Hypothetical protein.
       0.664
EDY20248.1
TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: mta:Moth_0735 competence-damaged protein; Belongs to the CinA family.
    
  0.647
EDY17095.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.604
EDY22016.1
PFAM: Pyrrolo-quinoline quinone; Xylose isomerase domain protein TIM barrel; KEGG: swi:Swit_1900 quinoprotein glucose dehydrogenase.
  
  0.587
EDY20196.1
PFAM: Pyrrolo-quinoline quinone; cytochrome c class I; KEGG: sus:Acid_1044 quinoprotein glucose dehydrogenase.
  
  0.587
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
    
  0.583
EDY21614.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: ava:Ava_1613 non-ribosomal peptide synthase.
  
    0.507
EDY21482.1
Malate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; KEGG: tpt:Tpet_1436 inosine-5'-monophosphate dehydrogenase.
    
  0.496
EDY19063.1
Nitrite reductase, copper-containing; KEGG: bba:Bd2608 major anaerobically induced transmembrane protein; TIGRFAM: nitrite reductase, copper-containing; PFAM: blue (type 1) copper domain protein; cytochrome c class I; multicopper oxidase type 2.
  
  0.484
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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