STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY16141.1PFAM: protein of unknown function DUF1080; KEGG: rba:RB5644 probable secreted glycosyl hydrolase. (238 aa)    
Predicted Functional Partners:
EDY21863.1
PFAM: oxidoreductase domain protein; KEGG: rba:RB11650 probable NADH-dependent deydrogenase.
  
     0.765
EDY20820.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rba:RB1555 probable NADH-dependent dehydrogenase.
  
     0.765
EDY22291.1
PFAM: protein of unknown function DUF1080; KEGG: rba:RB9439 putative large multi-functional protein.
  
     0.764
EDY21465.1
PFAM: oxidoreductase domain protein; KEGG: rba:RB1555 probable NADH-dependent dehydrogenase.
  
     0.763
EDY17765.1
PFAM: oxidoreductase domain protein; KEGG: rba:RB2833 conserved hypothetical protein-putative NADH-dependent dyhydrogenase.
  
     0.762
EDY19129.1
PFAM: oxidoreductase domain protein; KEGG: sus:Acid_4818 oxidoreductase domain protein.
  
     0.760
EDY19199.1
KEGG: pdi:BDI_1901 putative secreted glycosylhydrolase.
  
     0.758
EDY17595.1
PFAM: protein of unknown function DUF1080; KEGG: rba:RB9439 putative large multi-functional protein.
  
     0.758
EDY17764.1
KEGG: sus:Acid_4818 oxidoreductase domain protein.
  
     0.752
EDY17883.1
PFAM: glucose-methanol-choline oxidoreductase; KEGG: pat:Patl_2686 glucose-methanol-choline oxidoreductase.
  
     0.749
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.