STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY15991.1Hypothetical protein; KEGG: hau:Haur_1028 O-methyltransferase family 3. (258 aa)    
Predicted Functional Partners:
EDY22239.1
PFAM: phosphopantetheine-binding; KEGG: mxa:MXAN_4528 polyketide synthase.
  
 0.819
EDY22238.1
KR domain protein; PFAM: short-chain dehydrogenase/reductase SDR; Alcohol dehydrogenase zinc-binding domain protein; KR domain protein; KEGG: bur:Bcep18194_A3873 beta-ketoacyl synthase.
  
 
 0.801
EDY22237.1
Erythronolide synthase; PFAM: Methyltransferase type 11; Methyltransferase type 12; Beta-ketoacyl synthase; Acyl transferase; KEGG: hau:Haur_1873 beta-ketoacyl synthase.
  
 
 0.617
EDY17330.1
PFAM: peptidase U32; KEGG: cya:CYA_0765 peptidase, U32 family.
  
  
 0.610
EDY15992.1
PFAM: Ig domain protein group 2 domain protein; protein of unknown function DUF1549; KEGG: sus:Acid_5709 protein of unknown function DUF1549.
       0.427
EDY18669.1
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mxa:MXAN_4930 amine oxidase, flavin-containing.
     
 0.400
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.