STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY15975.1Hypothetical protein; KEGG: saz:Sama_1102 AAA ATPase containing von Willebrand factor type A (vWA) domain. (1174 aa)    
Predicted Functional Partners:
EDY15974.1
Hypothetical protein; KEGG: mmu:100042292 similar to CG10953-PA.
       0.773
EDY15973.1
Hypothetical protein.
       0.732
EDY21835.1
KEGG: sun:SUN_0606 hypothetical protein.
  
     0.701
EDY15972.1
Hypothetical protein.
       0.697
EDY15970.1
KEGG: chu:CHU_1911 conserved hypothetical protein with multiple MORN variant repeat domains.
       0.665
EDY15971.1
KEGG: rrs:RoseRS_1670 protein kinase.
       0.665
EDY17383.1
TIGRFAM: autotransporter-associated beta strand repeat protein; KEGG: bch:Bcen2424_4933 outer membrane autotransporter barrel domain.
  
     0.646
EDY18114.1
TIGRFAM: adhesin HecA family; autotransporter-associated beta strand repeat protein; KEGG: azc:AZC_1915 hypothetical protein.
  
     0.597
EDY15969.1
PFAM: MORN variant repeat protein; KEGG: fnu:FN2119 hypothetical exported 24-amino acid repeat protein.
       0.580
EDY17517.1
PFAM: NHL repeat containing protein; KEGG: ava:Ava_1140 hypothetical protein.
  
     0.574
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.