STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY15949.1PFAM: protein of unknown function DUF214; KEGG: cch:Cag_0990 ABC transporter efflux protein. (414 aa)    
Predicted Functional Partners:
EDY15947.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gfo:GFO_0536 ABC-type transporter ATP-binding protein.
  0.997
EDY17505.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_3037 ABC transporter-related protein.
  0.988
EDY17055.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_2447 ABC transporter related.
 
  0.987
EDY22243.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mth:MTH696 ABC transporter (glutamine transport ATP-binding protein).
 
  0.981
EDY18333.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbf:CLI_0969 ABC transporter, ATP-binding protein.
 
  0.969
EDY17646.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU2269 ABC transporter, ATP-binding protein.
 
  0.966
lolD
ABC transporter-related protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
  0.962
EDY19863.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tbd:Tbd_1583 ABC transporter ATPase.
 
 
  0.946
EDY15946.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cte:CT1348 membrane fusion efflux protein, putative; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.917
EDY19927.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU2651 amino acid ABC transporter, ATP-binding protein.
 
      0.896
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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