STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY15933.1PFAM: alpha/beta hydrolase fold; KEGG: noc:Noc_1153 alpha/beta hydrolase fold. (291 aa)    
Predicted Functional Partners:
EDY22239.1
PFAM: phosphopantetheine-binding; KEGG: mxa:MXAN_4528 polyketide synthase.
 
 0.998
EDY22238.1
KR domain protein; PFAM: short-chain dehydrogenase/reductase SDR; Alcohol dehydrogenase zinc-binding domain protein; KR domain protein; KEGG: bur:Bcep18194_A3873 beta-ketoacyl synthase.
 
 0.983
EDY22237.1
Erythronolide synthase; PFAM: Methyltransferase type 11; Methyltransferase type 12; Beta-ketoacyl synthase; Acyl transferase; KEGG: hau:Haur_1873 beta-ketoacyl synthase.
 
 0.962
EDY21615.1
Erythronolide synthase; PFAM: phosphopantetheine-binding; Beta-ketoacyl synthase; KEGG: hau:Haur_2416 beta-ketoacyl synthase.
  
 0.910
EDY17080.1
PFAM: peptidase S15; BAAT/Acyl-CoA thioester hydrolase; KEGG: rle:pRL80022 hypothetical protein.
 
  
 0.794
EDY17502.1
TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: pca:Pcar_1887 chorismate mutase-P and prephenate dehydratase.
     
 0.782
EDY21482.1
Malate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; KEGG: tpt:Tpet_1436 inosine-5'-monophosphate dehydrogenase.
    
 0.751
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
   
  0.750
EDY15897.1
PFAM: cobalamin synthesis protein P47K; ArgK protein; cobalamin B12-binding domain protein; KEGG: dol:Dole_2188 methylmalonyl-CoA mutase, large subunit.
     
 0.747
EDY15898.1
methylmalonyl-CoA mutase, large subunit; KEGG: gtn:GTNG_3336 putative methylmalonyl-CoA mutase protein; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
     
 0.747
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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