STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY15862.1Hypothetical protein; KEGG: vvu:VV1_1626 type IV pilin PilA. (201 aa)    
Predicted Functional Partners:
EDY17292.1
KEGG: rba:RB8008 hypothetical protein-putative general (type II) secretion pathway protein G.
  
     0.771
EDY21157.1
KEGG: rba:RB10099 hypothetical protein.
  
     0.724
EDY19037.1
KEGG: rba:RB2782 hypothetical protein-transmembrane prediction.
  
     0.706
EDY19146.1
Hypothetical protein; KEGG: yen:YE3568 general secretion pathway protein G precursor.
  
     0.670
EDY16625.1
Hypothetical protein; KEGG: aba:Acid345_1177 methylation.
  
     0.663
EDY19060.1
KEGG: rba:RB3542 hypothetical protein-signal peptide and transmembrane prediction.
  
     0.633
EDY22222.1
KEGG: rba:RB2907 hypothetical protein.
  
     0.548
EDY15863.1
PFAM: Monogalactosyldiacylglycerol synthase; KEGG: rrs:RoseRS_2020 monogalactosyldiacylglycerol synthase.
       0.514
EDY17993.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: rba:RB5420 hypothetical protein.
  
     0.485
EDY20916.1
KEGG: ade:Adeh_2104 hypothetical protein.
  
     0.455
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.