STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN12090.1TIGRFAM: type IV pilus assembly protein PilM; KEGG: mar:MAE_09710 type IV pilus assembly protein. (367 aa)    
Predicted Functional Partners:
ADN12091.1
PFAM: Fimbrial assembly family protein; KEGG: cyh:Cyan8802_4211 fimbrial assembly family protein.
 
 
 0.994
ADN12092.1
KEGG: cyh:Cyan8802_4210 type II and III secretion system protein.
 
 
 0.972
ADN13788.1
PFAM: Type II secretion system F domain; KEGG: mar:MAE_04110 pilin biogenesis protein.
 
 
 
 0.955
ADN12093.1
PFAM: type II and III secretion system protein; Secretin/TonB short domain; KEGG: mar:MAE_09740 type IV pilus assembly protein; Belongs to the bacterial secretin family.
 
 
 0.953
ADN13790.1
PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mar:MAE_04090 pilus biogenesis protein.
 
 
 0.903
ADN14161.1
PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mar:MAE_04090 pilus biogenesis protein.
 
 
 0.901
ADN15207.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.846
ADN13789.1
TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: cyh:Cyan8802_1637 twitching motility protein; SMART: AAA ATPase.
 
   
 0.837
ADN14298.1
TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: cyh:Cyan8802_3324 twitching motility protein; SMART: AAA ATPase.
 
   
 0.832
ADN14882.1
KEGG: mar:MAE_46550 pilin polypeptide.
 
  
 0.741
Your Current Organism:
Gloeothece verrucosa
NCBI taxonomy Id: 497965
Other names: Cyanothece sp. PCC 7822, G. verrucosa PCC 7822, Gloeothece verrucosa PCC 7822
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.