STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN12918.1PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: ava:Ava_3246 peptidase C14, caspase catalytic subunit P20. (346 aa)    
Predicted Functional Partners:
ADN12917.1
KEGG: npu:Npun_BR097 hypothetical protein.
       0.746
ADN12916.1
KEGG: npu:Npun_BR096 ATPase central domain-containing protein; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
 
     0.727
ADN12915.1
KEGG: ter:Tery_2228 hypothetical protein.
       0.689
ADN16197.1
KEGG: ana:alr1903 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein.
     0.646
ADN12914.1
Serine/threonine protein kinase; KEGG: ava:Ava_A0032 TPR repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain.
       0.634
ADN12280.1
Sigma 54 interacting domain protein; KEGG: amr:AM1_4295 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; TPR repeat-containing protein; SMART: WD-40 repeat protein.
 
     0.565
ADN14600.1
WD40 repeat, subgroup; KEGG: mar:MAE_38240 WD repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat protein.
 
     0.563
ADN12919.1
KEGG: ter:Tery_2759 hypothetical protein.
       0.560
ADN14508.1
WD40 repeat, subgroup; KEGG: mar:MAE_37440 WD repeat-containing protein; PFAM: WD40 repeat, subgroup; peptidase C14 caspase catalytic subunit p20; SMART: WD-40 repeat protein; Pyrrolo-quinoline quinone beta-propeller repeat.
  
     0.552
ADN13087.1
WD40 repeat, subgroup; KEGG: rrs:RoseRS_4025 NB-ARC domain-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat protein; Pyrrolo-quinoline quinone beta-propeller repeat.
  
     0.545
Your Current Organism:
Gloeothece verrucosa
NCBI taxonomy Id: 497965
Other names: Cyanothece sp. PCC 7822, G. verrucosa PCC 7822, Gloeothece verrucosa PCC 7822
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.