Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADN12380.1 | ADN12383.1 | Cyan7822_0334 | Cyan7822_0337 | PFAM: 4-vinyl reductase 4VR; KEGG: cyh:Cyan8802_1085 4-vinyl reductase 4VR. | PFAM: 4-vinyl reductase 4VR; KEGG: cyh:Cyan8802_1082 4-vinyl reductase 4VR. | 0.835 |
ADN12380.1 | ADN13211.1 | Cyan7822_0334 | Cyan7822_1206 | PFAM: 4-vinyl reductase 4VR; KEGG: cyh:Cyan8802_1085 4-vinyl reductase 4VR. | KEGG: npu:Npun_F4794 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. | 0.513 |
ADN12383.1 | ADN12380.1 | Cyan7822_0337 | Cyan7822_0334 | PFAM: 4-vinyl reductase 4VR; KEGG: cyh:Cyan8802_1082 4-vinyl reductase 4VR. | PFAM: 4-vinyl reductase 4VR; KEGG: cyh:Cyan8802_1085 4-vinyl reductase 4VR. | 0.835 |
ADN12383.1 | ADN13211.1 | Cyan7822_0337 | Cyan7822_1206 | PFAM: 4-vinyl reductase 4VR; KEGG: cyh:Cyan8802_1082 4-vinyl reductase 4VR. | KEGG: npu:Npun_F4794 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. | 0.513 |
ADN13211.1 | ADN12380.1 | Cyan7822_1206 | Cyan7822_0334 | KEGG: npu:Npun_F4794 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. | PFAM: 4-vinyl reductase 4VR; KEGG: cyh:Cyan8802_1085 4-vinyl reductase 4VR. | 0.513 |
ADN13211.1 | ADN12383.1 | Cyan7822_1206 | Cyan7822_0337 | KEGG: npu:Npun_F4794 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. | PFAM: 4-vinyl reductase 4VR; KEGG: cyh:Cyan8802_1082 4-vinyl reductase 4VR. | 0.513 |
ADN13211.1 | speA | Cyan7822_1206 | Cyan7822_1207 | KEGG: npu:Npun_F4794 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.413 |
speA | ADN13211.1 | Cyan7822_1207 | Cyan7822_1206 | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | KEGG: npu:Npun_F4794 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. | 0.413 |