STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN14101.1KEGG: cyh:Cyan8802_1439 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related. (223 aa)    
Predicted Functional Partners:
ADN14100.1
PFAM: glycosyl transferase family 39; KEGG: cyh:Cyan8802_1440 glycosyl transferase family 39.
  
    0.754
ADN13832.1
Beta-ketoacyl synthase; KEGG: syp:SYNPCC7002_A1173 polyketide synthase; PFAM: Beta-ketoacyl synthase; KR domain protein; AMP-dependent synthetase and ligase; phosphopantetheine-binding; sulfotransferase; alpha/beta hydrolase fold; Acyl transferase; SMART: Polyketide synthase, beta-ketoacyl synthase region.
   
 0.742
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.597
ADN15154.1
KEGG: ava:Ava_5027 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related.
  
     0.586
ADN15722.1
KEGG: mar:MAE_37130 eight transmembrane protein; TIGRFAM: eight transmembrane protein EpsH; PFAM: Exosortase EpsH-related.
    
 
 0.532
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.495
ADN14978.1
PFAM: protein of unknown function DUF1206; KEGG: npu:Npun_R6105 hypothetical protein.
 
     0.455
ADN13887.1
PFAM: lipopolysaccharide biosynthesis protein; KEGG: cyh:Cyan8802_2701 lipopolysaccharide biosynthesis protein.
 
  
 0.426
Your Current Organism:
Gloeothece verrucosa
NCBI taxonomy Id: 497965
Other names: Cyanothece sp. PCC 7822, G. verrucosa PCC 7822, Gloeothece verrucosa PCC 7822
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