STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN14440.1KEGG: cyh:Cyan8802_0694 hypothetical protein. (95 aa)    
Predicted Functional Partners:
ADN14441.1
WD40 repeat, subgroup; KEGG: mar:MAE_60790 WD repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat protein.
       0.785
ADN14443.1
KEGG: cyh:Cyan8802_0692 hypothetical protein.
       0.785
ADN17143.1
KEGG: cyh:Cyan8802_0674 hypothetical protein.
 
     0.778
ndhO
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.774
ADN14442.1
KEGG: syp:SYNPCC7002_A0131 MerR family transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR.
       0.773
ADN14806.1
KEGG: mar:MAE_35130 transcriptional regulator.
  
     0.773
ADN14848.1
KEGG: cyh:Cyan8802_3487 CO2 hydration protein; TIGRFAM: CO2 hydration protein; PFAM: CO2 hydration family protein.
  
     0.772
ADN13542.1
TIGRFAM: transcriptional regulator, AbrB family; KEGG: mar:MAE_13690 transcriptional regulator.
  
     0.770
ADN13418.1
KEGG: cyh:Cyan8802_4312 CO2 hydration protein; TIGRFAM: CO2 hydration protein; PFAM: CO2 hydration family protein.
  
     0.768
ADN16646.1
PFAM: cytochrome c class I; KEGG: ava:Ava_4020 cytochrome c, class I.
  
     0.768
Your Current Organism:
Gloeothece verrucosa
NCBI taxonomy Id: 497965
Other names: Cyanothece sp. PCC 7822, G. verrucosa PCC 7822, Gloeothece verrucosa PCC 7822
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