STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN17458.1PFAM: Aluminium resistance family protein; KEGG: cyh:Cyan8802_0663 aluminium resistance family protein. (410 aa)    
Predicted Functional Partners:
ADN12153.1
PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: cyh:Cyan8802_2389 Orn/Lys/Arg decarboxylase major region.
 
   
 0.764
ddl
D-alanine/D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
      0.718
sepF
Protein of unknown function DUF552; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
 
     0.686
mrnC
Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
  
     0.656
ADN17459.1
KEGG: cyh:Cyan8802_0662 stearoyl-CoA 9-desaturase; PFAM: fatty acid desaturase.
       0.523
ADN14826.1
TIGRFAM: photosystem II S4 domain protein; PFAM: RNA-binding S4 domain protein; KEGG: cyh:Cyan8802_3250 photosystem II S4 domain protein; SMART: RNA-binding S4 domain protein.
 
     0.459
ADN17457.1
KEGG: mar:MAE_45990 hypothetical protein.
       0.459
ADN13030.1
PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: cyh:Cyan8802_0325 fibronectin-binding A domain protein.
  
     0.416
Your Current Organism:
Gloeothece verrucosa
NCBI taxonomy Id: 497965
Other names: Cyanothece sp. PCC 7822, G. verrucosa PCC 7822, Gloeothece verrucosa PCC 7822
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