Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARO1 | B9J08_001934 | A0A2H0ZW78 | A0A2H0ZZ06 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | Shikimate_dh_N domain-containing protein. | 0.915 |
ARO1 | B9J08_003349 | A0A2H0ZW78 | A0A2H0ZN47 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | Tryptophan synthase. | 0.836 |
ARO1 | B9J08_004045 | A0A2H0ZW78 | A0A2H0ZP64 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | Uncharacterized protein. | 0.860 |
ARO1 | B9J08_004429 | A0A2H0ZW78 | A0A2H0ZIZ1 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | Uncharacterized protein. | 0.456 |
B9J08_001255 | B9J08_003349 | A0A2H1A1E5 | A0A2H0ZN47 | Alpha-glucosidase. | Tryptophan synthase. | 0.628 |
B9J08_001255 | B9J08_004429 | A0A2H1A1E5 | A0A2H0ZIZ1 | Alpha-glucosidase. | Uncharacterized protein. | 0.818 |
B9J08_001934 | ARO1 | A0A2H0ZZ06 | A0A2H0ZW78 | Shikimate_dh_N domain-containing protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | 0.915 |
B9J08_001934 | B9J08_003349 | A0A2H0ZZ06 | A0A2H0ZN47 | Shikimate_dh_N domain-containing protein. | Tryptophan synthase. | 0.836 |
B9J08_001934 | B9J08_004045 | A0A2H0ZZ06 | A0A2H0ZP64 | Shikimate_dh_N domain-containing protein. | Uncharacterized protein. | 0.860 |
B9J08_001934 | B9J08_004429 | A0A2H0ZZ06 | A0A2H0ZIZ1 | Shikimate_dh_N domain-containing protein. | Uncharacterized protein. | 0.419 |
B9J08_003349 | ARO1 | A0A2H0ZN47 | A0A2H0ZW78 | Tryptophan synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | 0.836 |
B9J08_003349 | B9J08_001255 | A0A2H0ZN47 | A0A2H1A1E5 | Tryptophan synthase. | Alpha-glucosidase. | 0.628 |
B9J08_003349 | B9J08_001934 | A0A2H0ZN47 | A0A2H0ZZ06 | Tryptophan synthase. | Shikimate_dh_N domain-containing protein. | 0.836 |
B9J08_003349 | B9J08_004045 | A0A2H0ZN47 | A0A2H0ZP64 | Tryptophan synthase. | Uncharacterized protein. | 0.999 |
B9J08_003349 | B9J08_004429 | A0A2H0ZN47 | A0A2H0ZIZ1 | Tryptophan synthase. | Uncharacterized protein. | 0.628 |
B9J08_004045 | ARO1 | A0A2H0ZP64 | A0A2H0ZW78 | Uncharacterized protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | 0.860 |
B9J08_004045 | B9J08_001934 | A0A2H0ZP64 | A0A2H0ZZ06 | Uncharacterized protein. | Shikimate_dh_N domain-containing protein. | 0.860 |
B9J08_004045 | B9J08_003349 | A0A2H0ZP64 | A0A2H0ZN47 | Uncharacterized protein. | Tryptophan synthase. | 0.999 |
B9J08_004045 | B9J08_004429 | A0A2H0ZP64 | A0A2H0ZIZ1 | Uncharacterized protein. | Uncharacterized protein. | 0.622 |
B9J08_004429 | ARO1 | A0A2H0ZIZ1 | A0A2H0ZW78 | Uncharacterized protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | 0.456 |
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