B9J08_001748 protein (Candida auris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B9J08_001748

Uncharacterized protein. (717 aa)

Predicted Functional Partners:

B9J08_001861

0.777

B9J08_003034

0.614

B9J08_001321

0.614

B9J08_001045

0.574

B9J08_003257

0.546

B9J08_003207

0.545

B9J08_002276

0.544

B9J08_001603

0.544

B9J08_003239

0.543

B9J08_001710

0.543

Your Current Organism:

Candida auris

NCBI taxonomy Id: 498019
Other names: B11220, CBS 10913, CBS10913, CDC B11220, Candida auris Satoh & Makimura, 2009, Candida sp. KM-143, DSM 21092, JCM 15448, JCM15448, [. auris, [Candida] auris

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9J08_001045	B9J08_001748	A0A2H1A6P1	A0A2H0ZYD1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.574
B9J08_001045	B9J08_003239	A0A2H1A6P1	A0A2H0ZMT0	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.647
B9J08_001045	B9J08_003257	A0A2H1A6P1	A0A2H0ZSU4	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	CDC73_C domain-containing protein.	0.887
B9J08_001321	B9J08_001748	A0A2H1A1M9	A0A2H0ZYD1	Uncharacterized protein.	Uncharacterized protein.	0.614
B9J08_001321	B9J08_001861	A0A2H1A1M9	A0A2H0ZYN4	Uncharacterized protein.	Uncharacterized protein.	0.892
B9J08_001321	B9J08_002276	A0A2H1A1M9	A0A2H0ZVY1	Uncharacterized protein.	ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.	0.847
B9J08_001603	B9J08_001710	A0A2H0ZYY0	A0A2H0ZPZ6	Uncharacterized protein.	Uncharacterized protein.	0.999
B9J08_001603	B9J08_001748	A0A2H0ZYY0	A0A2H0ZYD1	Uncharacterized protein.	Uncharacterized protein.	0.544
B9J08_001603	B9J08_003207	A0A2H0ZYY0	A0A2H0ZMQ3	Uncharacterized protein.	Uncharacterized protein.	0.999
B9J08_001603	B9J08_003239	A0A2H0ZYY0	A0A2H0ZMT0	Uncharacterized protein.	Uncharacterized protein.	0.999
B9J08_001710	B9J08_001603	A0A2H0ZPZ6	A0A2H0ZYY0	Uncharacterized protein.	Uncharacterized protein.	0.999
B9J08_001710	B9J08_001748	A0A2H0ZPZ6	A0A2H0ZYD1	Uncharacterized protein.	Uncharacterized protein.	0.543
B9J08_001710	B9J08_003207	A0A2H0ZPZ6	A0A2H0ZMQ3	Uncharacterized protein.	Uncharacterized protein.	0.999
B9J08_001710	B9J08_003239	A0A2H0ZPZ6	A0A2H0ZMT0	Uncharacterized protein.	Uncharacterized protein.	0.999
B9J08_001748	B9J08_001045	A0A2H0ZYD1	A0A2H1A6P1	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.574
B9J08_001748	B9J08_001321	A0A2H0ZYD1	A0A2H1A1M9	Uncharacterized protein.	Uncharacterized protein.	0.614
B9J08_001748	B9J08_001603	A0A2H0ZYD1	A0A2H0ZYY0	Uncharacterized protein.	Uncharacterized protein.	0.544
B9J08_001748	B9J08_001710	A0A2H0ZYD1	A0A2H0ZPZ6	Uncharacterized protein.	Uncharacterized protein.	0.543
B9J08_001748	B9J08_001861	A0A2H0ZYD1	A0A2H0ZYN4	Uncharacterized protein.	Uncharacterized protein.	0.777
B9J08_001748	B9J08_002276	A0A2H0ZYD1	A0A2H0ZVY1	Uncharacterized protein.	ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.	0.544

page 1 of 3

Server load: low (18%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About