Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B9J08_000442 | B9J08_000774 | A0A2H1A7X8 | A0A2H1A5X4 | Uncharacterized protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.984 |
B9J08_000442 | B9J08_000819 | A0A2H1A7X8 | A0A2H1A616 | Uncharacterized protein. | MIF4G domain-containing protein. | 0.864 |
B9J08_000442 | B9J08_000996 | A0A2H1A7X8 | A0A2H1A6I3 | Uncharacterized protein. | ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family. | 0.523 |
B9J08_000442 | B9J08_001243 | A0A2H1A7X8 | A0A2H1A2C2 | Uncharacterized protein. | Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. | 0.547 |
B9J08_000442 | B9J08_002399 | A0A2H1A7X8 | A0A2H0ZWA9 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.914 |
B9J08_000442 | B9J08_005188 | A0A2H1A7X8 | A0A2H0ZCZ3 | Uncharacterized protein. | MIF4G domain-containing protein. | 0.977 |
B9J08_000774 | B9J08_000442 | A0A2H1A5X4 | A0A2H1A7X8 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Uncharacterized protein. | 0.984 |
B9J08_000774 | B9J08_000819 | A0A2H1A5X4 | A0A2H1A616 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | MIF4G domain-containing protein. | 0.870 |
B9J08_000774 | B9J08_000996 | A0A2H1A5X4 | A0A2H1A6I3 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family. | 0.956 |
B9J08_000774 | B9J08_001243 | A0A2H1A5X4 | A0A2H1A2C2 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. | 0.954 |
B9J08_000774 | B9J08_001779 | A0A2H1A5X4 | A0A2H0ZYG9 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | LsmAD domain-containing protein. | 0.924 |
B9J08_000774 | B9J08_002399 | A0A2H1A5X4 | A0A2H0ZWA9 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Tr-type G domain-containing protein. | 0.912 |
B9J08_000774 | B9J08_005188 | A0A2H1A5X4 | A0A2H0ZCZ3 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | MIF4G domain-containing protein. | 0.994 |
B9J08_000774 | B9J08_005385 | A0A2H1A5X4 | A0A2H0ZEP1 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | RRM domain-containing protein. | 0.861 |
B9J08_000774 | PAN2 | A0A2H1A5X4 | A0A2H1A5S5 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] | 0.944 |
B9J08_000774 | PAN3 | A0A2H1A5X4 | A0A2H1A7K9 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] | 0.951 |
B9J08_000819 | B9J08_000442 | A0A2H1A616 | A0A2H1A7X8 | MIF4G domain-containing protein. | Uncharacterized protein. | 0.864 |
B9J08_000819 | B9J08_000774 | A0A2H1A616 | A0A2H1A5X4 | MIF4G domain-containing protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.870 |
B9J08_000819 | B9J08_000996 | A0A2H1A616 | A0A2H1A6I3 | MIF4G domain-containing protein. | ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family. | 0.707 |
B9J08_000819 | B9J08_001243 | A0A2H1A616 | A0A2H1A2C2 | MIF4G domain-containing protein. | Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. | 0.852 |
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