STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9J08_000188Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (747 aa)    
Predicted Functional Partners:
B9J08_004876
Uncharacterized protein.
   
 0.998
B9J08_003259
G-patch domain-containing protein.
   
 0.996
B9J08_003497
G-patch domain-containing protein.
    
 0.990
B9J08_003574
U-box domain-containing protein.
   
 0.987
B9J08_003198
Uncharacterized protein.
   
 0.987
B9J08_002211
Sas10 domain-containing protein.
   
 0.987
B9J08_003547
Uncharacterized protein.
   
 0.985
B9J08_003130
Tr-type G domain-containing protein.
   
 
 0.984
B9J08_001796
Uncharacterized protein.
  
 
0.981
B9J08_002903
Uncharacterized protein.
   
 0.980
Your Current Organism:
Candida auris
NCBI taxonomy Id: 498019
Other names: B11220, CBS 10913, CBS10913, CDC B11220, Candida auris Satoh & Makimura, 2009, Candida sp. KM-143, DSM 21092, JCM 15448, JCM15448, [. auris, [Candida] auris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.