STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJA_0068Hypothetical protein; Identified by Glimmer3; putative. (356 aa)    
Predicted Functional Partners:
CJA_0067
Cyclopropane-fatty-acyl-phospholipid synthase.
 
     0.956
gt4G
Glycosyl transferase, putative, gt4G; Identified by match to protein family HMM PF00534.
 
     0.955
CJA_0304
Putative secreted protein.
  
     0.775
CJA_0070
Conserved hypothetical protein TIGR00046; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.773
CJA_0303
Hypothetical protein; Identified by Glimmer3; putative.
 
     0.658
CJA_0064
Putative OmpA-like transmembrane domain; Identified by match to protein family HMM PF01389; match to protein family HMM TIGR03304.
       0.558
CJA_0065
Hypothetical protein; Identified by Glimmer3; putative.
       0.558
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.