STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJA_0283TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM TIGR03304. (778 aa)    
Predicted Functional Partners:
CJA_0281
Major facilitator family transporter; Identified by match to protein family HMM PF07690.
 
    0.854
CJA_3627
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM TIGR01782; match to protein family HMM TIGR03304.
  
     0.742
CJA_0733
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM TIGR01782; match to protein family HMM TIGR03304.
  
     0.729
CJA_0215
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM TIGR01782; match to protein family HMM TIGR03304.
  
    0.718
CJA_3160
tonB dependent receptor-related protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF01851; match to protein family HMM TIGR01782; match to protein family HMM TIGR03304.
  
     0.671
CJA_0734
Tryptophan halogenase.
  
     0.667
CJA_3304
TonB-dependent receptor; Identified by match to protein family HMM PF00593.
  
     0.649
agd31B
Alpha-glucosidase, putative, adg31B; Alpha-transglucosylase that specifically transfers single glucosyl units from alpha(1->4)-glucans to the non-reducing terminal 4- OH of glucose and alpha(1->4)- and alpha(1->6)-linked glucosyl residues. Acts on amylose, amylopectin, glycogen and maltooligosaccharides, with the highest activity with maltotriose as a donor, and also accepts maltose. Does not act as a hydrolase: weak hydrolysis activity is only observed on the disaccharide maltose.
  
     0.642
CJA_1050
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM TIGR01782; match to protein family HMM TIGR03304.
  
     0.637
CJA_3629
Conserved hypothetical protein.
  
     0.605
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.