Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CJA_1062 | CJA_1064 | CJA_1062 | CJA_1064 | Metabolite transport protein-like protein; Identified by match to protein family HMM PF07690. | Hypothetical protein; Identified by Glimmer3; putative. | 0.648 |
| CJA_1062 | gcvP | CJA_1062 | CJA_1061 | Metabolite transport protein-like protein; Identified by match to protein family HMM PF07690. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.494 |
| CJA_1062 | gspA | CJA_1062 | CJA_1063 | Metabolite transport protein-like protein; Identified by match to protein family HMM PF07690. | General secretion pathway protein a. | 0.648 |
| CJA_1064 | CJA_1062 | CJA_1064 | CJA_1062 | Hypothetical protein; Identified by Glimmer3; putative. | Metabolite transport protein-like protein; Identified by match to protein family HMM PF07690. | 0.648 |
| CJA_1064 | gcvP | CJA_1064 | CJA_1061 | Hypothetical protein; Identified by Glimmer3; putative. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.424 |
| CJA_1064 | gspA | CJA_1064 | CJA_1063 | Hypothetical protein; Identified by Glimmer3; putative. | General secretion pathway protein a. | 0.809 |
| gcvP | CJA_1062 | CJA_1061 | CJA_1062 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Metabolite transport protein-like protein; Identified by match to protein family HMM PF07690. | 0.494 |
| gcvP | CJA_1064 | CJA_1061 | CJA_1064 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Hypothetical protein; Identified by Glimmer3; putative. | 0.424 |
| gcvP | gspA | CJA_1061 | CJA_1063 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | General secretion pathway protein a. | 0.424 |
| gspA | CJA_1062 | CJA_1063 | CJA_1062 | General secretion pathway protein a. | Metabolite transport protein-like protein; Identified by match to protein family HMM PF07690. | 0.648 |
| gspA | CJA_1064 | CJA_1063 | CJA_1064 | General secretion pathway protein a. | Hypothetical protein; Identified by Glimmer3; putative. | 0.809 |
| gspA | gcvP | CJA_1063 | CJA_1061 | General secretion pathway protein a. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.424 |