Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CJA_1185 | CJA_1186 | CJA_1185 | CJA_1186 | Identified by match to protein family HMM PF00899. | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. | 0.493 |
| CJA_1185 | CJA_1965 | CJA_1185 | CJA_1965 | Identified by match to protein family HMM PF00899. | RNA pseudouridine synthase family protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.663 |
| CJA_1185 | moeB | CJA_1185 | CJA_0654 | Identified by match to protein family HMM PF00899. | Molybdopterin biosynthesis MoeB protein; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237. | 0.482 |
| CJA_1185 | thiG | CJA_1185 | CJA_2108 | Identified by match to protein family HMM PF00899. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.455 |
| CJA_1186 | CJA_1185 | CJA_1186 | CJA_1185 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. | Identified by match to protein family HMM PF00899. | 0.493 |
| CJA_1965 | CJA_1185 | CJA_1965 | CJA_1185 | RNA pseudouridine synthase family protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Identified by match to protein family HMM PF00899. | 0.663 |
| moeB | CJA_1185 | CJA_0654 | CJA_1185 | Molybdopterin biosynthesis MoeB protein; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237. | Identified by match to protein family HMM PF00899. | 0.482 |
| moeB | thiG | CJA_0654 | CJA_2108 | Molybdopterin biosynthesis MoeB protein; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.965 |
| thiG | CJA_1185 | CJA_2108 | CJA_1185 | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Identified by match to protein family HMM PF00899. | 0.455 |
| thiG | moeB | CJA_2108 | CJA_0654 | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Molybdopterin biosynthesis MoeB protein; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237. | 0.965 |