Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CJA_1268 | CJA_1270 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer3; putative. | 0.752 |
| CJA_1268 | CJA_1271 | Conserved hypothetical protein. | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.757 |
| CJA_1268 | CJA_1272 | Conserved hypothetical protein. | Probable NAGC-like transcription regulator yajF; Similar to yajF Escherichia coli (strain O157:H7, substrain EDL933); identified by match to protein family HMM PF00480. | 0.444 |
| CJA_1270 | CJA_1268 | Hypothetical protein; Identified by Glimmer3; putative. | Conserved hypothetical protein. | 0.752 |
| CJA_1270 | CJA_1271 | Hypothetical protein; Identified by Glimmer3; putative. | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.744 |
| CJA_1270 | CJA_1272 | Hypothetical protein; Identified by Glimmer3; putative. | Probable NAGC-like transcription regulator yajF; Similar to yajF Escherichia coli (strain O157:H7, substrain EDL933); identified by match to protein family HMM PF00480. | 0.455 |
| CJA_1271 | CJA_1268 | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Conserved hypothetical protein. | 0.757 |
| CJA_1271 | CJA_1270 | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Hypothetical protein; Identified by Glimmer3; putative. | 0.744 |
| CJA_1271 | CJA_1272 | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Probable NAGC-like transcription regulator yajF; Similar to yajF Escherichia coli (strain O157:H7, substrain EDL933); identified by match to protein family HMM PF00480. | 0.472 |
| CJA_1272 | CJA_1268 | Probable NAGC-like transcription regulator yajF; Similar to yajF Escherichia coli (strain O157:H7, substrain EDL933); identified by match to protein family HMM PF00480. | Conserved hypothetical protein. | 0.444 |
| CJA_1272 | CJA_1270 | Probable NAGC-like transcription regulator yajF; Similar to yajF Escherichia coli (strain O157:H7, substrain EDL933); identified by match to protein family HMM PF00480. | Hypothetical protein; Identified by Glimmer3; putative. | 0.455 |
| CJA_1272 | CJA_1271 | Probable NAGC-like transcription regulator yajF; Similar to yajF Escherichia coli (strain O157:H7, substrain EDL933); identified by match to protein family HMM PF00480. | Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.472 |