STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJA_1592ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. (378 aa)    
Predicted Functional Partners:
afuB_2
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
 0.958
CJA_1591
ABC transporter, substrate binding protein; Identified by match to protein family HMM PF01547.
 
 0.936
CJA_3619
Binding-protein-dependent transport systems inner membrane component domain protein; Identified by match to protein family HMM PF00528.
 
 0.913
CJA_3618
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
  
  
 
0.912
CJA_3620
Putative Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547.
 
 
 0.907
CJA_1574
ABC transporter substrate binding protein; Identified by match to protein family HMM PF01547.
 
 
 0.897
CJA_3614
ABC-type multidrug transport system, permease component; Identified by match to protein family HMM PF01061.
 
      0.896
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.858
oppC
Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
    0.818
CJA_2242
Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     0.722
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
Server load: low (18%) [HD]