Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CJA_1607 | CJA_1608 | Putative lipoprotein; Identified by match to protein family HMM PF03886. | Conserved domain protein. | 0.954 |
| CJA_1607 | CJA_1609 | Putative lipoprotein; Identified by match to protein family HMM PF03886. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00806. | 0.864 |
| CJA_1607 | CJA_1610 | Putative lipoprotein; Identified by match to protein family HMM PF03886. | ABC-type transport system, permease component; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056. | 0.856 |
| CJA_1607 | CJA_1612 | Putative lipoprotein; Identified by match to protein family HMM PF03886. | Hypothetical protein; Identified by Glimmer3; putative. | 0.558 |
| CJA_1608 | CJA_1607 | Conserved domain protein. | Putative lipoprotein; Identified by match to protein family HMM PF03886. | 0.954 |
| CJA_1608 | CJA_1609 | Conserved domain protein. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00806. | 0.944 |
| CJA_1608 | CJA_1610 | Conserved domain protein. | ABC-type transport system, permease component; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056. | 0.912 |
| CJA_1608 | CJA_1612 | Conserved domain protein. | Hypothetical protein; Identified by Glimmer3; putative. | 0.558 |
| CJA_1609 | CJA_1607 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00806. | Putative lipoprotein; Identified by match to protein family HMM PF03886. | 0.864 |
| CJA_1609 | CJA_1608 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00806. | Conserved domain protein. | 0.944 |
| CJA_1609 | CJA_1610 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00806. | ABC-type transport system, permease component; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056. | 0.999 |
| CJA_1609 | CJA_1612 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00806. | Hypothetical protein; Identified by Glimmer3; putative. | 0.566 |
| CJA_1610 | CJA_1607 | ABC-type transport system, permease component; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056. | Putative lipoprotein; Identified by match to protein family HMM PF03886. | 0.856 |
| CJA_1610 | CJA_1608 | ABC-type transport system, permease component; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056. | Conserved domain protein. | 0.912 |
| CJA_1610 | CJA_1609 | ABC-type transport system, permease component; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00806. | 0.999 |
| CJA_1610 | CJA_1612 | ABC-type transport system, permease component; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056. | Hypothetical protein; Identified by Glimmer3; putative. | 0.566 |
| CJA_1612 | CJA_1607 | Hypothetical protein; Identified by Glimmer3; putative. | Putative lipoprotein; Identified by match to protein family HMM PF03886. | 0.558 |
| CJA_1612 | CJA_1608 | Hypothetical protein; Identified by Glimmer3; putative. | Conserved domain protein. | 0.558 |
| CJA_1612 | CJA_1609 | Hypothetical protein; Identified by Glimmer3; putative. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00806. | 0.566 |
| CJA_1612 | CJA_1610 | Hypothetical protein; Identified by Glimmer3; putative. | ABC-type transport system, permease component; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056. | 0.566 |
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