STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJA_1811FHA domain protein; Identified by match to protein family HMM PF00498. (296 aa)    
Predicted Functional Partners:
ppkA
Serine/threonine protein kinase PpkA; Identified by match to protein family HMM PF00069; match to protein family HMM PF03781.
 
 
 
 0.801
CJA_3295
Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF00515.
 
 
 
 0.761
sucA
2-oxoglutarate dehydrogenase, E1 component; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM TIGR00239.
    
 
 0.720
CJA_0854
Serine/threonine kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF00515.
 
 
 
 0.610
CJA_1646
Identified by match to protein family HMM PF00481.
 
   
 0.604
CJA_1812
Hypothetical protein; Identified by Glimmer3; putative.
       0.538
CJA_0329
Putative dual serine/threonine-protein kinase/phosphatase; Identified by match to protein family HMM PF00069.
 
 
 
 0.528
fliN
Flagellar protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.524
CJA_0604
ABC-2 type transporter; Identified by match to protein family HMM PF01061.
  
     0.511
cel5A
Endo-1,4-beta glucanase, cel5A; Identified by similarity to PIR:S19652; match to protein family HMM PF00150; match to protein family HMM PF00553; match to protein family HMM PF02013.
  
     0.508
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.