STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gly57AGlycoside hydrolase, putative, gly57A; Identified by match to protein family HMM PF03065. (574 aa)    
Predicted Functional Partners:
gt5A
ADP-glucose:starch glucosyltransferase, gt5A; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
    0.835
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
     0.816
mal77Q
4-alpha-glucanotransferase, putative, mal77; Identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217.
 
     0.714
gspL
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.612
gt35A
Carbohydrate phosphosrylase, putative, gt35A; Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094.
 
  
 0.574
CJA_1881
Hypothetical protein; Identified by Glimmer3; putative.
       0.518
CJA_0299
Hypothetical protein; Identified by Glimmer3; putative.
  
     0.476
gbe13A
1,4-alpha-glucan branching enzyme, putative, gbe13A; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
     
 0.407
gspJ
General secretion pathway protein J; Identified by match to protein family HMM TIGR01711.
  
     0.403
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
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