Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CJA_2253 | CJA_2254 | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | FrdA; Identified by match to protein family HMM PF00890. | 0.980 |
| CJA_2253 | CJA_2255 | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Ferredoxin, 4Fe-4S; Identified by match to protein family HMM PF00037; match to protein family HMM PF03860. | 0.926 |
| CJA_2253 | CJA_2256 | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | ABC transporter substrate-binding protein. | 0.844 |
| CJA_2253 | CJA_2257 | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.636 |
| CJA_2253 | CJA_2258 | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.582 |
| CJA_2253 | CJA_2259 | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | HEAT repeat protein; Identified by match to protein family HMM PF03130. | 0.954 |
| CJA_2253 | CJA_2260 | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Conserved hypothetical protein. | 0.736 |
| CJA_2254 | CJA_2253 | FrdA; Identified by match to protein family HMM PF00890. | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | 0.980 |
| CJA_2254 | CJA_2255 | FrdA; Identified by match to protein family HMM PF00890. | Ferredoxin, 4Fe-4S; Identified by match to protein family HMM PF00037; match to protein family HMM PF03860. | 0.952 |
| CJA_2254 | CJA_2256 | FrdA; Identified by match to protein family HMM PF00890. | ABC transporter substrate-binding protein. | 0.880 |
| CJA_2254 | CJA_2257 | FrdA; Identified by match to protein family HMM PF00890. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.822 |
| CJA_2254 | CJA_2258 | FrdA; Identified by match to protein family HMM PF00890. | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.742 |
| CJA_2254 | CJA_2259 | FrdA; Identified by match to protein family HMM PF00890. | HEAT repeat protein; Identified by match to protein family HMM PF03130. | 0.964 |
| CJA_2254 | CJA_2260 | FrdA; Identified by match to protein family HMM PF00890. | Conserved hypothetical protein. | 0.823 |
| CJA_2255 | CJA_2253 | Ferredoxin, 4Fe-4S; Identified by match to protein family HMM PF00037; match to protein family HMM PF03860. | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | 0.926 |
| CJA_2255 | CJA_2254 | Ferredoxin, 4Fe-4S; Identified by match to protein family HMM PF00037; match to protein family HMM PF03860. | FrdA; Identified by match to protein family HMM PF00890. | 0.952 |
| CJA_2255 | CJA_2256 | Ferredoxin, 4Fe-4S; Identified by match to protein family HMM PF00037; match to protein family HMM PF03860. | ABC transporter substrate-binding protein. | 0.884 |
| CJA_2255 | CJA_2257 | Ferredoxin, 4Fe-4S; Identified by match to protein family HMM PF00037; match to protein family HMM PF03860. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.855 |
| CJA_2255 | CJA_2258 | Ferredoxin, 4Fe-4S; Identified by match to protein family HMM PF00037; match to protein family HMM PF03860. | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.732 |
| CJA_2255 | CJA_2259 | Ferredoxin, 4Fe-4S; Identified by match to protein family HMM PF00037; match to protein family HMM PF03860. | HEAT repeat protein; Identified by match to protein family HMM PF03130. | 0.901 |
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