STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJA_2432Dps family protein; Identified by match to protein family HMM PF00210; Belongs to the Dps family. (155 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adaptor protein clpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.796
CJA_2284
Trp repressor binding protein; Identified by match to protein family HMM PF00258; Belongs to the WrbA family.
  
  
 0.651
CJA_2564
Protein kinase; Identified by match to protein family HMM PF06798.
   
    0.559
CJA_1426
Putative sigma 54 modulation protein.
   
    0.540
yfiA
Ribosomal subunit interface protein; Identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741.
   
    0.540
cueA
Copper transporter; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
  
  
 0.534
ahpC
AhpC; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.524
CJA_1067
Probable peroxidase; Identified by match to protein family HMM PF00578.
  
  
 0.524
CJA_2352
Antioxidant protein LsfA; Identified by match to protein family HMM PF00578.
  
  
 0.517
CJA_2433
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
       0.493
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.