STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJA_2912Putative Na+/H+ antiporter NhaD. (419 aa)    
Predicted Functional Partners:
kefB
Glutathione-regulated potassium-efflux system protein; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
   
 0.634
arsR
Arsenic resistance operon regulator; Identified by match to protein family HMM PF01022.
  
  
 0.584
CJA_2911
Putative pH regulated Na(+)/H(+) antiporter; Identified by match to protein family HMM PF00999.
     
 0.510
CJA_0208
Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022.
  
  
 0.479
CJA_1783
Protein-tyrosine-phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.451
arsC
Arsenate reductase; Identified by match to protein family HMM PF03960; match to protein family HMM TIGR00014.
     
 0.446
guaA
GMP synthase, C- domain protein; Catalyzes the synthesis of GMP from XMP.
  
    0.438
CJA_2902
Putative lipoprotein.
 
     0.437
CJA_3002
Oxidoreductase, zinc-binding dehydrogenase family; Identified by match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801.
  
  
 0.436
mshD
MSHA pilin protein MshD.
  
     0.425
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
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