STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJA_3102Conserved hypothetical protein; Identified by similarity to GB:AAT04961.1. (291 aa)    
Predicted Functional Partners:
CJA_3101
Oxidoreductase, GMC family.
 
     0.877
CJA_3100
Conserved hypothetical protein.
 
     0.851
CJA_3343
Oxidoreductase family, NAD-binding Rossmann fold domain protein; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
 
  
 0.745
ce2C
Acetyl xylan esterase, putative, axe2A; Involved in the degradation of plant cell wall polysaccharides. Catalyzes the deacetylation of acetylated birchwood xylan and glucomannan, with a large preference for the latter, and of the synthetic substrate 4-nitrophenyl acetate (4-NPAc).
       0.634
gfo
Glucose-fructose oxidoreductase; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM TIGR01409.
 
  
 0.630
CJA_3344
Identified by match to protein family HMM PF07582.
 
     0.610
CJA_0838
AGR_pAT_7p, (AF151698) GlnP/GlnQ homolog; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
 
  
 0.577
nupG
Nucleoside-transport system protein; Identified by match to protein family HMM PF03825; match to protein family HMM PF07690.
 
    0.558
CJA_1274
Oxidoreductase; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
  
  
 0.503
CJA_2753
Oxidoreductase; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
  
  
 0.503
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.