STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gly30AGlycoside hydrolase family 30, gly30A; Identified by match to protein family HMM PF02055; Belongs to the glycosyl hydrolase 30 family. (480 aa)    
Predicted Functional Partners:
bgl2A
Beta-galactosidase, putative, bgl2A; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.939
bgl2C
Beta-galactosidase, putative, bgl2C; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.935
bgl2B
Beta-galactosidase, putative, bgl2B; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.928
cel3B
Glucan 1,4-beta-glucosidase, putative, cel3B; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915.
   
 0.756
cel3A
Glucan 1,4-beta-glucosidase cel3A; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915.
    
 0.698
cel5G
Cellulase, putative, cel5G; Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.678
glu5A
Glucan exo-1,3-beta glucosidase, putative, glu5A; Identified by match to protein family HMM PF00041; match to protein family HMM PF00150; match to protein family HMM PF03422; match to protein family HMM PF03860.
 
   
 0.601
glu16D
Beta glucanase, putative, glu16D; Identified by match to protein family HMM PF00722; match to protein family HMM PF00754.
 
   
 0.575
gal53A-1
Arabinogalactan endo-1,4-beta-galactosidase, putative, gal53A; Identified by match to protein family HMM PF00652.
  
   
 0.552
gal53B
Arabinogalactan endo-1,4-beta-galactosidase, putative, gal53B.
  
   
 0.552
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.